Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNDKMLAR-------------------IAALLRQAEG--------TDNPHEADAFMSTAQRLATAA-SIDLAVARSHAGNRSPAQAPTQR-----TITIGAAGTRGLRTYVQ-----LFVLIAAANDVRCDVASNSTFVYAYGF--AEDIDTSHALYASLVVQMVRA-SDAYLASGAHRPTPTITARLNFQLAFGARVGQRL-----ADAREQTRQEATKDRDRPPGT--------AIALRDKDIELHEYYRRSSKARGAWRASRATAGYSSAARRAGDRAGRQ----ARLGNNPELPGARAALGR------------------ |
| 2GJL Chain:A ((3-326)) | VFRTRFTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGNDPGEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALG-ADAINMGTRFLATRECPIHPAVKAAIRAADERSTDLIMRSLRNTARVARNAISQEVLAIEARGGAGYADIAALVSGQRGRQVYQQGDTDLGIWSAGMVQGLIDDEPACAELLRDIVEQARQLVRQRLEGMLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GJL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40551 for 1795 contacts (-22.6/contact) +
2D Compatibility (PS) -26767 + (NN) -7507 + (LL) 176
1D Compatibility (HY) 1200 + (ID) 1650
Total energy: -75099.0 ( -41.84 by residue)
QMean score : 0.230
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