Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAEPIPGAQRVAWMRELFPFDRVVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNAD---------FAQVL--GARFVAVDHGRTVVPVTATDIRADPL--GHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKWVPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLAGGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVITGGWEERLSVSLRAVEELVRARR |
| 4F3R Chain:A ((5-156)) | KPIAIYPGTFDPLTNGHVDIIERALPLFNKIIVACAPT----LKLEERVNLIADVLTDERVEVLP-LTG----L-L------VDFAKTH---QANFILRGLRAVSDFDYEFQLAHMNYQLSPEIETIFLPAREGYSYVSGTMVREIVTLGGDVSPFVPPLVARHL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F3R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79284 for 1014 contacts (-78.2/contact) +
2D Compatibility (PS) -14243 + (NN) -6158 + (LL) 13864
1D Compatibility (HY) -6400 + (ID) 1050
Total energy: -93271.0 ( -91.98 by residue)
QMean score : 0.315
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