Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVDGRDIGVSGNLLQPLTRRT-NDIIRAVLAAIYLVAVI--TSSLITRPQWVALEKSISEIVG--------VLSPSQSDLVYLGYGLAILALPFVILIGLIVSRQWKLLGAYAAAGLMAVLPLSIS------------SSRIAAPRWHFDLSDRLATLLAQFLDDPRWIAMLAAVLTVSGPWLPARWRHWWWALLLAFVPIHLVVSAIVPARSLL---GLAV--GWLVGALVVLVVGTPALEVPLDGAIRALAKRGFAVSGLAV--------VRPAGPGPLVLSAACEQPNAGAC--------SEALIELYGPHQSGG--------GALRQLWLKLTLRGTETAPLQASMRR--AVEHRALMAIAFGDL-----GMANTTVIAVSPLDRGWTLYAHRPARGIGISECTKTTPTAHVWEALRTLHD----QQISHGDLCSAEITVDNGAVLFG--GFGEAEYGATDAQLQSDLAQLLVTTSAL--YDAEA--AVTAAIDTFGK-QAILAASRRLTKSAVPKRIRESITDPNAVIASTRAEVMRQTGADQIKAETITRFSRGQLIQ-LVLIGALVYVAYPFISTVPTFFSQLRTANWWWALLGLAVSALTYVG----AAAALWACADGLVGFWKLSIMQVANTFAATTTPAGVGGLALSTRFLQ-----KGGLTAVRATAAVALQQSVQVIVHLVLLILFSALAGTSTDLSHFVPNATVLYLIAGVALGIVGTFLFVPK-LRRWLATAVRPKLREVTNDLIALAREPKRLALIVLGCAGTTLGA----ALALWASIEAFGGGTTFVTVTVVTMVGGTLASAAPTPGGVGAVEAALIGGLAAFGVPAALGVPSVLLYRLLTCWLPVFAGWQVMHWLTRHEMI---- |
| 4ZM6 Chain:A ((8-858)) | ----NLDKEIGQLLMCGFDGLEPTPGIIDLIENHNLGSIILFSRNIATPKQVQKLTHSLQQIARNAGHKRPLFIAVDQENGVVRRLGDSGTYLPGNMALGALGSSTAARNVAMAISKELLTLGMNWNLAPVLDVNNNPLNPVIGVRSYGQDPELVARMGLAQVEGYQRG-KVATSIKHFPGHGDTATDSHLD-VPVINKTLEELDKTELVPFKKALEAGGIACPTSVMVGHMLLPHFNKDVVSSIAPEIVRDLLRRRFGYKGVIITDCLEMDAVKETVGTPKGALMALQAGNDMAMISHTLAFQKDAFKVLYSALQEGQLDKDEIRQSLQRVAQLKDQFLNWDDVLQQADLKTMGSEAHATLSKELYDRVPTVVTNRKNTLPIRPAQTDKILFLAAHVPEK----------EPFNSFHASLLKRHTNLEYIIYNEETPDLSQKIQEADWVIIGTANANLYPFQVRMVQQAQKLAKRLVVAAVMNPYDQMCFPQVDTYLVTYEYTPPAHEAAVRLIFGEIETRSRLPISIPNVDDAIAPATFIVDDYRNDDDLDHVTAMWDDIFGKDWPLRKDKINLGLQRAKLQKHKVARDSQGK----IVGFVATQIVVVDNKKHGQLMLLMVSPSYQG--KGVGTLLHDAALEHFREQGADCIKLGSTYPRFFPGVPDDDAQSRKAQAFFSKKGWRMDDNLVHDLIGDLQDYKVPDKIQARMLKEKIWFGRIKPSETWELYAFQQRNFPHWLSTYQHHVELGDYQDLIVARQDDENGRVIASLILNTTHVSHEYRSDLIWTDDKLFGERSGGMACVGV----------AQEERGRGIGIGIVAHANWLLKQR---GVTKSYVD-----WVELLDFYSRVGYKTWRSYRLGHF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -548091 for 6224 contacts (-88.1/contact) +
2D Compatibility (PS) -79069 + (NN) -9585 + (LL) 3668
1D Compatibility (HY) -8000 + (ID) 6300
Total energy: -647377.0 ( -104.01 by residue)
QMean score : 0.240
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