Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPRRWLRAVAVIGATAMLLASSCT---WQLSLFITDGVPPPPGDPVPPVDT----------HAGGRPADQLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLDG---TGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGHPL |
| 1FMT Chain:A ((1-206)) | SESLRIIFAGTP--DFAARHLDALLSSGHNVVGVFTQPDRPLMPSPVKVLAEEKGLPVFQPV-----SLRP--QENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPR-------WRGA---------APIQRSLWAGDAETGVTIMQMDVGLDT-----------GD-MLYKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLADGT-----------AKPE---------VQDETLVTYAEK-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1FMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -67757 for 1514 contacts (-44.8/contact) +
2D Compatibility (PS) -19914 + (NN) -9004 + (LL) 3044
1D Compatibility (HY) -3200 + (ID) 1600
Total energy: -98431.0 ( -65.01 by residue)
QMean score : 0.333
|
|
|