Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQSATARQPEPEVAEAFRITPLEAPLGAEVRGLDARRPLAPEQVLALKQALREHHILVFR-QQHLDDEQYLRFATLFGSVFQPPADIPVLSSGGDGKVPDIVKVANTGDGELGNFALPAHIDHQWTPVPSSGSFLYALEVPSSGGETRFTNLARAYESLDEATRREIDGLRLINYNPFIRLREGGYGGGFATYRTPDIEPIQGSEHPLVRTHPESGRRVLFLSAHTEVEIPGYDPARGQALIGRLREHLARPELSYSHAWSVGDIVWWDNQAVLHARNAFPASERRRLKRISLAGSRPF |
| 4J5I Chain:D ((10-275)) | -------------------VTKLGAHIGARIDGVRVGGDLSPATVSAINAALLEHKVIFFSGQDHLDDAGQLEFAELLGT---PT-------------------------------ANSWHTDVTFVDRIPKASLLRAVTLPSYGGTTAWASTEAAYQQLPAPLRTLADNLWAVHTNR-------------------DYYEV---EHPVVRVHPETGERVLLL-GHFVKSFVGLKDTESAALFRLFQDRITRLENTVRWSWKPGDLAIWDNRATQHYAVADYDDQYRRLNRVTLAGDIPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114445 for 1769 contacts (-64.7/contact) +
2D Compatibility (PS) -24298 + (NN) -18146 + (LL) 2792
1D Compatibility (HY) -13200 + (ID) 4050
Total energy: -171347.0 ( -96.86 by residue)
QMean score : 0.515
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