Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEQRQTLPAQHQDQRPGHESQMQPKPEFVSADYRPAAKLEGKVALVTGGDSGIGRAVAVAFAREKADVVLVYLDENEDAAKTREIIESLGRQCLAFAGDVADAGFCRQVVDTLRQKWGRLDVLVNNAGEQHPQARLEDISEEQWEKTFRTNIFGMFQLTKAALPLMGKGGAIINTTSITAYKGNPQLIDYSSTKGAITSFTRSLSMNLVNRGIRVNAVAPGPIWTPLIPSTFSAEKVAHFGADTPMGRPGQPEELAASYVYLACNDSSYVSGQVLHVNGGTVVNG |
4I5D Chain:F ((14-258)) | ------------------------------------AYRLLNKTAVITGGNSGIGLATAKRFVAEGAYVFIVGRRRKELEQAAAEI----GRNVTAVKADVTKLEDLDRLYAIVREQRGSIDVLFANSGAIE-QKTLEEITPEHYDRTFDVNVRGLIFTVQKALPLLRDGGSVILTSSVAGVLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVNAVSPGAIDTP-----------AKFAAATPLGRVGRPEELAAAVLFLASDDSSYVAGIELFVDGGLTQV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100688 for 1968 contacts (-51.2/contact) +
2D Compatibility (PS) -24710 + (NN) -9622 + (LL) 3084
1D Compatibility (HY) -15200 + (ID) 4850
Total energy: -151986.0 ( -77.23 by residue)
QMean score : 0.506
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