Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQRIVIVGGGVGGTMLANLLVVRLYPEILGGEVQVLLISDSPDHYYKP--AFMYVAFEQFFLEDLKRPQRSLLR-PEVMFQL-DRVDRFDFPRQELQTRSGRRHGYDYLVIATGCVPAPERIEGLK-EAGDHFYQYQPARRLAERLASLESGRVFITVSFPRTPNVPHQCGIAPVETTLMLDDYLRRRGVRERVEIVYTYPTTAQLLRNCLFLQ---RPTCEILPSLFEQRGIRFQRGFTLARVDPERR---IAYSEEGDEQPFDLLMATPPIHAVD-AVRECGLPQAAADEGWLPTNHETLQVYGVDRVYTLGDTVDLPV---------SKAGGACHNQAPVVASNIAAEIRLGKPCAIYDGRVQAVAQMGLNAGMPLWYDYRHDVKPTPPTKLGGLLRQGFNRGLYWAVARGML |
| 3LXD Chain:A ((9-321)) | RADVVIVGAGHGGAQAAIALRQNG------FEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELDA-GAKNAVVIG------G-----GYIGLEAAAVLTK----FGV----NVTLLEALPR------VLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISAGAS----GGNGVDVDEF-CRTS-LTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGA----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216959 for 2446 contacts (-88.7/contact) +
2D Compatibility (PS) -30401 + (NN) -2415 + (LL) 6236
1D Compatibility (HY) -4400 + (ID) 2650
Total energy: -250589.0 ( -102.45 by residue)
QMean score : 0.405
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