Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MSRDGVQVLSILGRDY----SIRVPAGEERALADAAALLQAEVDANKRKFPYVTSNELVVLSALNLCARQLGANDGESPRLRAVEQRLEALVERIAGASG--------
2HJQ Chain:A ((1-111))
MFTAKLIKGKTYNVMGITFRAGVSQTVPKKLYEYLNENPYFILTQELNNQKDDPINYTESELKGMNKAEHESIISNLGRNPSDFKNADERIAYILKQIDNKGELEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2HJQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28689 for 559 contacts (-51.3/contact) +
2D Compatibility (PS) -10496 + (NN) -4156 + (LL) 0
1D Compatibility (HY) -800 + (ID) 450
Total energy: -44591.0 ( -79.77 by residue)
QMean score : 0.331
(partial model without unconserved sides chains):
PDB file :
Tito_2HJQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HJQ-query.scw
PDB file :
Tito_Scwrl_2HJQ.pdb
: