Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTLLLLLLVLLELGEAQGSLHRVPLRRHPSLKKKLRARSQLSEFWKSHNLDMIQFTESCSMDQSAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGSLSGIIGADQVSAFATQVEGLTVVGQQFGESVT--EPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMFCSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAP--VDGEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVP |
2BJU Chain:A ((125-451)) | --------------------------------------------------------------SSNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSGTVSGFFSKDLVT-----VGNLSLPYK-FIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDK--HTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGNIML---EKANCIVDSGTSAITVPTDFLNKMLQNLDVIKVPFLPFYVTLCNN-SKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCMLNIIGLDFP---VPTFILGDPFMRKYFTVFDYDNHSVGIALAKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BJU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195589 for 2680 contacts (-73.0/contact) +
2D Compatibility (PS) -35032 + (NN) -16148 + (LL) 5960
1D Compatibility (HY) -27600 + (ID) 5450
Total energy: -273859.0 ( -102.19 by residue)
QMean score : 0.292
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