Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLSDGEWQLVLNVWGKVEADIPGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPLAQSHATKHKIPVKYLEFISECIIQVLQSKHPGDFGADAQGAMNKALELFRKDMASNYKELGFQG
3V2Z Chain:A ((1-152))
-GLSDGEWQQVLNVWGKVEADIAGHGQEVLIRLFTGHPETLEKFDKFKHLKTEAEMKASEDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLHSKHPGDFGADAQGAMTKALELFRNDIAAKYKELGFQ-
General information:
TITO was launched using:
RESULT:
Template:
3V2Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71682 for 1129 contacts (-63.5/contact) +
2D Compatibility (PS) -16546 + (NN) -11492 + (LL) 36
1D Compatibility (HY) -17200 + (ID) 6700
Total energy: -123584.0 ( -109.46 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_3V2Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V2Z-query.scw
PDB file :
Tito_Scwrl_3V2Z.pdb
: