Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFSGNWKIIRSENFEEMLKALGVNMMMRKIAVAAASKPAVEIKQENDTFYIKTSTTVRTTEINFKIGEEFEEQTVDGRPCKSLVKWESGNKMVCEQRLLKGEGPKTSWSRELTNDGELILTMTADDVVCTRVYVRE
4I9R Chain:A ((1-137))
-PNFSGNWKIIRSENFEELLKVLGVNVMLRKIWVAAASKPAVEIKQEGDTFYIKVSTTVWTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTKELTNDGELILTMTADDVVCTLVFVRE
General information:
TITO was launched using:
RESULT:
Template:
4I9R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29717 for 962 contacts (-30.9/contact) +
2D Compatibility (PS) -15303 + (NN) -5177 + (LL) 208
1D Compatibility (HY) -18400 + (ID) 6100
Total energy: -74489.0 ( -77.43 by residue)
QMean score : 0.426
(partial model without unconserved sides chains):
PDB file :
Tito_4I9R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I9R-query.scw
PDB file :
Tito_Scwrl_4I9R.pdb
: