Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPGCMSCKCVLS
3RRZ Chain:A ((1-166))
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQY-EQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3RRZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103135 for 1363 contacts (-75.7/contact) +
2D Compatibility (PS) -17741 + (NN) -1534 + (LL) 588
1D Compatibility (HY) -23200 + (ID) 8250
Total energy: -153272.0 ( -112.45 by residue)
QMean score : 0.657
(partial model without unconserved sides chains):
PDB file :
Tito_3RRZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RRZ-query.scw
PDB file :
Tito_Scwrl_3RRZ.pdb
: