Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPIPNNPGAGENAFDPVFVNDDDGYDLDSFMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNE-------EFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFVGFSIPDHFVVGYSLDYNEIFRDLDHCCLVNDEGKKKYKATSL
1TC1 Chain:A ((4-187))-----------------------------------YE-FAEKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDF--------NV-PVRMEFICVSSY--------VRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYVVANIPNAFVIGYGLDYDDTYRELRDIVVLRPE----------


General information:
TITO was launched using:
RESULT:

Template: 1TC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -190815 for 1322 contacts (-144.3/contact) +
2D Compatibility (PS) -17662 + (NN) -1860 + (LL) 1320
1D Compatibility (HY) -16800 + (ID) 2550
Total energy: -228367.0 ( -172.74 by residue)
QMean score : 0.480

(partial model without unconserved sides chains):
PDB file : Tito_1TC1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1TC1-query.scw
PDB file : Tito_Scwrl_1TC1.pdb: