Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATRSPGVVISDDEPGYDLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCND-QSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRSVGYKPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVISETGKAKYKA
3HVU Chain:A ((24-200))
-------------------------AMMNQDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKGAMPFMADLLKRT---------DTYLEMDFMAVSSYGHSTVSTGEVKILKDLD-TSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPTGRKVDLKADYVGFTVPHEFVVGYGLDYKEQYRNLPYVGVLKPS-------
General information:
TITO was launched using:
RESULT:
Template:
3HVU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146918 for 1356 contacts (-108.3/contact) +
2D Compatibility (PS) -19607 + (NN) -8144 + (LL) 1804
1D Compatibility (HY) -18400 + (ID) 3300
Total energy: -194565.0 ( -143.48 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_3HVU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HVU-query.scw
PDB file :
Tito_Scwrl_3HVU.pdb
: