Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | AFYKREMFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLTKKLHFFPKSN |
| 3QNW Chain:H ((9-98)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVD------AIGKKQVPCFASMLTKKLHFFPK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35165 for 502 contacts (-70.0/contact) +
2D Compatibility (PS) -8842 + (NN) -2310 + (LL) 12200
1D Compatibility (HY) -13600 + (ID) 4200
Total energy: -51917.0 ( -103.42 by residue)
QMean score : 0.122
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