Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIGIIGAMEEEVTILKNKLTQLSEISVAHV----KFYTGILKDREVVITQSGIGKVNAAISTTLLINKFKPDVIINTGSAGAL--DESLNVGDVLISDDVKYHDADATAFGYEYGQIPQMPVAFQSSKPLIEKVSQVVQ-QQ-QLTAKVGLIVSGDSFIGSVEQRQKIKKAFPNAMAVEMEATAIAQTCYQFNVPFVVVRAVSDLANGEA-EMSFEAFLEKAAVSSSQTVEALVSQL |
| 4L0M Chain:A ((23-259)) | MILIISAMQEESEEINKILDNKEEIVLNDYLENKKIYKGKILGKDVISLTTGIGKVNAATWSSQIISKYKITHIINSGSSGGIKENSNLKILDIIVSSETAYYDFDLTKFGHKIGQVPNLPQKFKADEELLKKVANIVDNKLLNIDIHIGLILTGDQFVDNEKNLETIKKNFKDALAVDMEGAAIAQVAHIFKIPFIIIRSISDLPNNKDNHIDFNKFLKTSSINSSKMTKELIRLI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4L0M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -122641 for 1961 contacts (-62.5/contact) +
2D Compatibility (PS) -24692 + (NN) -10147 + (LL) 0
1D Compatibility (HY) -21200 + (ID) 4150
Total energy: -182830.0 ( -93.23 by residue)
QMean score : 0.548
|
|
|