Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADPRPDPDELARRAAQVIADRTGIGEHDVAVVLGSGWLPAVAALGSPTTVLPQAELPGFVPPTAAGHAGELLSVPIGAHRVLVLAGRIHAYEGHDLRYVVHPVRAARAAGAQIMVLTNAAGGLRADLQVGQPVLISDHLNL---TARSPLVG-------GEFVDLTDAYSPRLRELAR----QSDPQ--LAEGVYAGLPGPHYETPAEIRMLQTLGADLVGMSTVHETIAARAAGAEVLGVSLVTNLAAGI--TGEPLSHAEVLAAGAASATRMGALLADVIARF |
| 3FUC Chain:A ((7-282)) | --------YEDYQDTAKWLLSHTEQ-RPQVAVICGSGLGGLVNKLTQAQ-TFDYSEIPNFP--------GRLVFGILNGRACVMMQGRFHMYEGYPFWKVTFPVRVFRLLGVETLVVTNAAGGLNPNFEVGDIMLIRDHINLPGFSGENPLRGPNEERFGVRFPAMSDAYDRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVIMDYESQGKANHEEVLEAGKQAAQKLEQFVSLLMASI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -178951 for 2095 contacts (-85.4/contact) +
2D Compatibility (PS) -26884 + (NN) -4528 + (LL) -164
1D Compatibility (HY) -19200 + (ID) 4850
Total energy: -234577.0 ( -111.97 by residue)
QMean score : 0.677
|
|
|