Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVEPETTPTPNPPPAEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV
1IPB Chain:A ((27-217))
--------------------------EVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV
General information:
TITO was launched using:
RESULT:
Template:
1IPB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78425 for 1338 contacts (-58.6/contact) +
2D Compatibility (PS) -20074 + (NN) -9213 + (LL) 728
1D Compatibility (HY) -26800 + (ID) 9500
Total energy: -143284.0 ( -107.09 by residue)
QMean score : 0.742
(partial model without unconserved sides chains):
PDB file :
Tito_1IPB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IPB-query.scw
PDB file :
Tito_Scwrl_1IPB.pdb
: