Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVSTASTEMSVRKIAAHMKSNPNAKVIFMVGAGISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELY--PGNFRPSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELVKPAIVFFGEDLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEIP-RKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEELGWQEDFEKILTAQGGMGDNSKEQLLEIVHDLENLSLDQSEHESADKKDKKLQRLNGHDSDEDGASNSSSSQKAAKE
1YC5 Chain:A ((2-245))----------KMKEFLDLLNE--SRLTVTLTGAGISTPSGIPDF-------------------QNVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAG--SKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDVP---LCDDCNSLIRPNIVFFGENLPQDALREAIGL-------------SSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPF----DDIATLKYNMDVVEFARRVMEEGGI--------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1YC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145319 for 1939 contacts (-74.9/contact) +
2D Compatibility (PS) -24708 + (NN) -7498 + (LL) 6164
1D Compatibility (HY) -18000 + (ID) 4200
Total energy: -193561.0 ( -99.83 by residue)
QMean score : 0.304

(partial model without unconserved sides chains):
PDB file : Tito_1YC5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YC5-query.scw
PDB file : Tito_Scwrl_1YC5.pdb: