Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKTRGLPKAKSHAPEVITSSPLK
2J95 Chain:A ((1-234))
IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKT--------------------
General information:
TITO was launched using:
RESULT:
Template:
2J95.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145131 for 1980 contacts (-73.3/contact) +
2D Compatibility (PS) -25354 + (NN) -7325 + (LL) 852
1D Compatibility (HY) -32000 + (ID) 11700
Total energy: -220658.0 ( -111.44 by residue)
QMean score : 0.721
(partial model without unconserved sides chains):
PDB file :
Tito_2J95.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J95-query.scw
PDB file :
Tito_Scwrl_2J95.pdb
: