Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MTALSSENC---------SFQYQLRQTNQPLDV------NYLLFLIILGKILLNILTLGMRRKNTC-----------QNFMEYFCISLAF------------VDLLLLVNISIILYFRDFVLLSIRFTKYHICLFTQIISFTYGFLHYPVFLT-------ACID---------YCLNFSKTTKLSFKCQKLFYFFTV----------ILIWISVLAY--VLGDPA---IYQSLKAQNAYSRHCP--FYVSIQSYWLSFFMVMILFVAFITCWEEVTTLVQAIRITSYMNETILYFPFSSHSSYTVRSKKIFLSKLIVCFLSTWL-PFVLLQVIIVLLKVQIPAYIE-MNIP-WLYFVNSFLIATVYWFNCHKLNLKDIGLPLDP-----FVNWKCCFIPLTIPNLEQIEKPIS---IMIC--------------- |
| 4C1N Chain:A ((1-442)) | GLTGLEIYKHLPKKNCKECGQPTCLAFAMQIAAGKAGLDACPYVSDEAKELLESASAPPVALIKVGKGEKVLEIGHETVLFRHDKRFEHPCGLAILVEDTLSEGEIKERVEKINKLVFDRVGQMHSVNLVALKGSSQDAATFAKAVATAREVTDLPFILIGTPEQLAAALETEGANNPLLYAATADNYEQMVELAKKYNVPLTVSAKGLDALAELVQKITALGYKNLILDPQPENISEGLFYQTQIRRLAIKKLFRPFGYPTIAFALDENPYQAVMEASVYIAKYAGIIVLNTVEPADILPLITLRLNIYTDPQKPIAVEPKVYEILNPGPDAPVFITTNFSLTYFCVAGDVEGARIPAYILPVDTDGTSVLTAWAAGKFTPEKIAQFLKESGIAEKVNHRKAILPGGVAVLSGKLQELSGWEILVGPRESSGINSFIKQRW |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -400807 for 2446 contacts (-163.9/contact) +
2D Compatibility (PS) -34826 + (NN) 2814 + (LL) 0
1D Compatibility (HY) -6400 + (ID) 2750
Total energy: -441969.0 ( -180.69 by residue)
QMean score : 0.147
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