Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNESRWTEWRILNMSSGIVNVSERHSCPLGFGHYSVVDVCIFETVVIVLLTFLIIAGNLTVIFVFHCAPLLHHYTTSYFIQTMAYADLFVGVSCLVPTLSLLHYSTGVHESLTCQVFGYIISVLKSVSMACLACISVDRYLAITKPLSYNQLVTPCRLRICIILIWIYSCLIFLPSFFGWGKPGYHGDIFEWCA-------TSWLTS-AYFTGF-IVCLLYAPAAFVVCFTYFHIFKICRQHTKEINDRRARFP----------------------S---------------------------------------------------------------------------------------H-E----------------VD---------------SSRETGHSPDRRYAMVLFRITSVFYMLWLPYIIYFLLESSRVL---DNPTLSFLTTWLAISNSFCNCVIYSLSNSVFRLGLRRLSETMCTSCMCVKDQEAQEPKPRKRANSCSI |
| 3EML Chain:A ((22-472)) | ----------------------------------------SVYITVELAIAVLAILGNVLVCWAVWLNSNL-QNVTNYFVVSLAAADIAVGVLAIPFAITIS-T-GFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQ----SQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVP-LLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -278909 for 2112 contacts (-132.1/contact) +
2D Compatibility (PS) -29202 + (NN) -2368 + (LL) 3952
1D Compatibility (HY) -22000 + (ID) 3550
Total energy: -332077.0 ( -157.23 by residue)
QMean score : 0.308
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