Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRHSKRTYCPDWDDKDWDYGKWRSSSSHKRRKRSHSSAQENKRCKYNHSKMCDSHYLESRSINEKDYHSRRYIDEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSKHRIHHSTSHRRSHGKSHRRKRTRSVEDDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRC--VQMLEWFEHHGHICIVFELLG--LSTY-DFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYV--SRRCKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI |
| 3NUX Chain:A ((12-300)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------QYECVAEIGEGA-GKVFKARDLKNGGRFVALKRVR-----PLSTIREVAVLRHLETFEHPNVVRLFDVC--------TKLTLVFEHVDQDLTTYLDKVPEPGV---PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-------------------QIKLADFGLA-----------VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG-LPGEE---------------DWPRDVALPRQAFH-KSAQPIEKFVTDID---ELGKDLLLKCLTFNPAKRISAYSALSHPYFQ------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NUX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169613 for 1912 contacts (-88.7/contact) +
2D Compatibility (PS) -27131 + (NN) -14182 + (LL) 10824
1D Compatibility (HY) -20800 + (ID) 5000
Total energy: -225902.0 ( -118.15 by residue)
QMean score : 0.483
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