Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ISCSTVYSTLMPCPQYVQQ---GGS----PARGCCTGIQNLLAEANNSPDRRTICGCLKNVANGASG--GP----------YITRAAALPSKCNVALPYKISPSVDCNSIH
1HSS Chain:A ((15-104))
-------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPIV-------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44824 for 397 contacts (-112.9/contact) +
2D Compatibility (PS) -6125 + (NN) 1325 + (LL) 944
1D Compatibility (HY) -4800 + (ID) 600
Total energy: -54080.0 ( -136.22 by residue)
QMean score : 0.375
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: