Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVSCNTVIADLYPCLSYVTQ---GGP----VPTLCCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGLT--L---SP----RTIQNALELPSKCGVDLPYKFSPSTDCDSIQ
1HSS Chain:A ((15-103))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPI--------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53729 for 399 contacts (-134.7/contact) +
2D Compatibility (PS) -6387 + (NN) -1005 + (LL) 1572
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -63699.0 ( -159.65 by residue)
QMean score : 0.332
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: