Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QCNAGNLAVCASPIVSGTPPSKTCCNNLKSQRGCFCQFAHNRAYSSYINSPNARKTLVSCGVPVPKC
M040 Chain:A ((1-96))
QCNAGNLAVCASPIVSGTPPSKTCCNNLKSQRGCFCQFAHNRAYSSYINSPNARKTLVSCGVPVPKC
General information:
TITO was launched using:
RESULT:
Template:
M040.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26490 for 430 contacts (-61.6/contact) +
2D Compatibility (PS) -7004 + (NN) -4105 + (LL) 0
1D Compatibility (HY) -8800 + (ID) 3350
Total energy: -49749.0 ( -115.70 by residue)
QMean score : 0.399
(partial model without unconserved sides chains):
PDB file :
Tito_M040.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M040-query.scw
PDB file :
Tito_Scwrl_M040.pdb
: