Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------------------------------------IDLCGMTQAELNECLPAVSKNNP-----------TSPSLLCCNALKHADYTC----------------LCGYKNSP---WLGSFGVDPKLASSLPKECDLTNAPTC
1K6K Chain:A ((1-142))
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGT-------
General information:
TITO was launched using:
RESULT:
Template:
1K6K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27238 for 345 contacts (-79.0/contact) +
2D Compatibility (PS) -7258 + (NN) -2680 + (LL) 260
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -41116.0 ( -119.18 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_1K6K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K6K-query.scw
PDB file :
Tito_Scwrl_1K6K.pdb
: