Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----EGAGECGRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTLGKSPSCLCAVMLSGTAKMAGIKP-EVAITIPKRCNMADRPVGYKCGDYTLP------------
1A8Y Chain:? ((127-228))
VELIEGERELQAFENIEDEIKL---IGYFKNKDSEHYKAFKEAAEEF-HPYIPFFATFDSKVAKKLTLKLNEIDFYEA----FMEEPVTIPDKPNSEEEIVNFVEEHRRS
General information:
TITO was launched using:
RESULT:
Template:
1A8Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31024 for 548 contacts (-56.6/contact) +
2D Compatibility (PS) -8854 + (NN) -2257 + (LL) 28
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -44457.0 ( -81.13 by residue)
QMean score : 0.218
(partial model without unconserved sides chains):
PDB file :
Tito_1A8Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A8Y-query.scw
PDB file :
Tito_Scwrl_1A8Y.pdb
: