Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceAPRGAHGAGECGKTPADKMALKLAPCASAGQDPKSVPSSGCCTAVHTIGKQSPKCLCAVMLSDTAKSAGIKPEVAMSIPKRCNLVDRPVGYKCGAYTLP
M040 Chain:A ((1-138))APRGAHGAGECGKTPADKMALKLAPCASAGQDPKSVPSSGCCTAVHTIGKQSPKCLCAVMLSDTAKSAGIKPEVAMSIPKRCNLVDRPVGYKCGAYTLP


General information:
TITO was launched using:
RESULT:

Template: M040.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28788 for 732 contacts (-39.3/contact) +
2D Compatibility (PS) -10362 + (NN) -6509 + (LL) 0
1D Compatibility (HY) -11200 + (ID) 4950
Total energy: -61809.0 ( -84.44 by residue)
QMean score : 0.253

(partial model without unconserved sides chains):
PDB file : Tito_M040.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-M040-query.scw
PDB file : Tito_Scwrl_M040.pdb: