Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APAGTTCEQLESVARSCTGYLKRSLIFLNDACCDGAESVYDALTTDAAVDLGFVCR------C-LRGFVISESLRPYLYRVANLPRLCRFKDRGPIPYNNSTIHDCRFSGTTRHSL
2HFT Chain:? ((1-106))
--SGTT----NTVAAYNLTWKSTNFKTILEWEPKPVNQVYTVQISTKSGDWKSKCFYTTDTECDLTDEIVKDVKQTYLARVFSYPA--GNVESTEPLYENSP----EFT-PYLET-
General information:
TITO was launched using:
RESULT:
Template:
2HFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20411 for 648 contacts (-31.5/contact) +
2D Compatibility (PS) -9637 + (NN) -85 + (LL) 924
1D Compatibility (HY) -1200 + (ID) 1000
Total energy: -31409.0 ( -48.47 by residue)
QMean score : -0.085
(partial model without unconserved sides chains):
PDB file :
Tito_2HFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HFT-query.scw
PDB file :
Tito_Scwrl_2HFT.pdb
: