Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | QATATAPSCTDVISNTAPCLPYISRTSPAPSDVCCAGIKNVAAMASTHANQVDICTCLKSNIAGFSYDPTLIAALPKKCSVSINLLPISASTDCSKVSLGN |
M040 Chain:A ((6-102)) | QATATAPSCTDVISNTAPCLPYISRTSPAPSDVCCAGIKNVAAMASTHANQVDICTCLKSNIAGFSYDPTLIAALPKKCSVSINLLPISASTDCSKVSLGN |
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General information:
TITO was launched using:
| RESULT:
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Template: M040.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3696 for 689 contacts (5.4/contact) +
2D Compatibility (PS) -9330 + (NN) 2420 + (LL) 0
1D Compatibility (HY) 6000 + (ID) 100
Total energy: 2686.0 ( 3.90 by residue)
QMean score : -0.046
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