Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | AVSNCGQVVSYLAPCITYATGRAPGPNGGCCSGVRSLNAAASTTADRQATCSCLKQQTSGMGGIKPDLVAGIPSKCGVNIPYAIKPSTDCTKVR |
M040 Chain:A ((2-94)) | AVSNCGQVVSYLAPCITYATGRAPGPNGGCCSGVRSLNAAASTTADRQATCSCLKQQTSGMGGIKPDLVAGIPSKCGVNIPYAIKPSTDCTKVR |
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General information:
TITO was launched using:
| RESULT:
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Template: M040.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8881 for 675 contacts (13.2/contact) +
2D Compatibility (PS) -9269 + (NN) -837 + (LL) 0
1D Compatibility (HY) 6400 + (ID) 400
Total energy: 4775.0 ( 7.07 by residue)
QMean score : -0.005
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