Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceAPPSCPTVTTQLAPCLSYIQGGGDPSVPCCTGINNIYELAKTKEDRVAICNCLKTAFTHAGNVNPTLVAQLPKKCGISFNMPPIDKNYDCNTISMY
M040 Chain:A ((2-97))APPSCPTVTTQLAPCLSYIQGGGDPSVPCCTGINNIYELAKTKEDRVAICNCLKTAFTHAGNVNPTLVAQLPKKCGISFNMPPIDKNYDCNTISMY


General information:
TITO was launched using:
RESULT:

Template: M040.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 15842 for 704 contacts (22.5/contact) +
2D Compatibility (PS) -9449 + (NN) -1491 + (LL) 0
1D Compatibility (HY) 6800 + (ID) 400
Total energy: 11302.0 ( 16.05 by residue)
QMean score : -0.029

(partial model without unconserved sides chains):
PDB file : Tito_M040.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-M040-query.scw
PDB file : Tito_Scwrl_M040.pdb: