Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AITCGQVSSAIAPCLSYARGMGSAPSAGCCSGVRNLKSAASTAADRRAACNCLKNAARGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSR
M040 Chain:A ((1-91))
AITCGQVSSAIAPCLSYARGMGSAPSAGCCSGVRNLKSAASTAADRRAACNCLKNAARGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSR
General information:
TITO was launched using:
RESULT:
Template:
M040.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50937 for 666 contacts (-76.5/contact) +
2D Compatibility (PS) -9635 + (NN) -2297 + (LL) 0
1D Compatibility (HY) -9600 + (ID) 4550
Total energy: -77019.0 ( -115.64 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_M040.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M040-query.scw
PDB file :
Tito_Scwrl_M040.pdb
: