Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCSPLQLSPCAGAITGSGPPSATCCSRLREQTPCLCGYYRDPNLRQYVNSPNAQKVARTCGVSVRC
M040 Chain:A ((1-106))
VTCSPLQLSPCAGAITGSGPPSATCCSRLREQTPCLCGYYRDPNLRQYVNSPNAQKVARTCGVSVRC
General information:
TITO was launched using:
RESULT:
Template:
M040.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32880 for 438 contacts (-75.1/contact) +
2D Compatibility (PS) -7222 + (NN) -5674 + (LL) 0
1D Compatibility (HY) -8800 + (ID) 3350
Total energy: -57926.0 ( -132.25 by residue)
QMean score : 0.674
(partial model without unconserved sides chains):
PDB file :
Tito_M040.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M040-query.scw
PDB file :
Tito_Scwrl_M040.pdb
: