Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
NGPCSNTLSSLSACMPAIEGENPQSPSVACCDVVRGSDASCLCSIVTTYANLTDAMGINLRAALLLPKQCKRAVPSGFTCGEID
M040 Chain:A ((1-126))
NGPCSNTLSSLSACMPAIEGENPQSPSVACCDVVRGSDASCLCSIVTTYANLTDAMGINLRAALLLPKQCKRAVPSGFTCGEID
General information:
TITO was launched using:
RESULT:
Template:
M040.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47693 for 600 contacts (-79.5/contact) +
2D Compatibility (PS) -8998 + (NN) -6118 + (LL) 0
1D Compatibility (HY) -11600 + (ID) 4200
Total energy: -78609.0 ( -131.01 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_M040.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M040-query.scw
PDB file :
Tito_Scwrl_M040.pdb
: