Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AQTCSASLANLNACAPFVVLGAATTPSSDCCTALQSVDHECLCNTLRIASRVPAQCNLPPLSCGAN
M040 Chain:A ((1-144))
AQTCSASLANLNACAPFVVLGAATTPSSDCCTALQSVDHECLCNTLRIASRVPAQCNLPPLSCGAN
General information:
TITO was launched using:
RESULT:
Template:
M040.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56651 for 467 contacts (-121.3/contact) +
2D Compatibility (PS) -6659 + (NN) -2057 + (LL) 0
1D Compatibility (HY) -8800 + (ID) 3300
Total energy: -77467.0 ( -165.88 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_M040.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M040-query.scw
PDB file :
Tito_Scwrl_M040.pdb
: