Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGATPPDRMALKLAPCASAAQNPSSAPSNGCCTAVHTIGKQSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP
M040 Chain:A ((1-162))
AGECGATPPDRMALKLAPCASAAQNPSSAPSNGCCTAVHTIGKQSPQCLCAVMLSKTAKKSGIKPEVAITIPKRCNLVDRPVGYKCGDYTLP
General information:
TITO was launched using:
RESULT:
Template:
M040.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30992 for 716 contacts (-43.3/contact) +
2D Compatibility (PS) -9842 + (NN) -11404 + (LL) 0
1D Compatibility (HY) -10800 + (ID) 4600
Total energy: -67638.0 ( -94.47 by residue)
QMean score : 0.444
(partial model without unconserved sides chains):
PDB file :
Tito_M040.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M040-query.scw
PDB file :
Tito_Scwrl_M040.pdb
: