Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------AGECGRVPVDQVALKLA--------PCAA-------------ATQNPRAAVPPSCCAQVRAIGRVPKCLCAVMLSDTARKAGVKPAVA---MTIPKRCAIANRPVGYKCGPYTL-P---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 1D0V Chain:A ((4-349)) | LHALLRDIPAPDAEAMARTQQHIDGLLKPPGSLGR--LETLAVQLAGMPGLNGTPQVGEKAVLVMCADHGVWDEGVAVSPKIVTAIQAANMTRGTTGVC-----VLAAQAGAKVHVIDVGIDAEPIPGVVNMRVARGCGNIAVGPAMSRLQAEALLLEVSRYACDLAQRGVTLFGVGELGMANTTPAAAMVSVFTGSDAKEVVGIGANLPPSRIDNKVDVVRRAIAINQPNPRDGIDVLSKVGGFDLVGMTGVMLGAARCGLPVLLDGFLSYSAALAACQIAPAVRPYLIPSHFSAEKGARIALAHLSMEPYLHMAMRLGEGSGAALAMPIVEAACAMFHNMGELAASNIVLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13255 for 396 contacts (-33.5/contact) +
2D Compatibility (PS) -9010 + (NN) -6144 + (LL) 744
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -30265.0 ( -76.43 by residue)
QMean score : 0.375
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