Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | AGKCGKTPAEKVALKLAPCAKAAQDPGARPPAACCAAVRDIGTHQSHACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRPVGYKCGGLMTTYDGLV |
M040 Chain:A ((6-135)) | AGKCGKTPAEKVALKLAPCAKAAQDPGARPPAACCAAVRDIGTHQSHACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRPVGYKCGGLMTTYDGLV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: M040.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 8329 for 682 contacts (12.2/contact) +
2D Compatibility (PS) -9411 + (NN) 1165 + (LL) 0
1D Compatibility (HY) 5200 + (ID) 500
Total energy: 4783.0 ( 7.01 by residue)
QMean score : -0.066
|
|
|