Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AAATTCNAGQLAACAAAVMTGAKPSAACCSNLRAQQRCFCNYAKNPVYGRYIKSPYVRQTVATCGIVLPRC
M040 Chain:A ((1-111))
AAATTCNAGQLAACAAAVMTGAKPSAACCSNLRAQQRCFCNYAKNPVYGRYIKSPYVRQTVATCGIVLPRC
General information:
TITO was launched using:
RESULT:
Template:
M040.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45822 for 480 contacts (-95.5/contact) +
2D Compatibility (PS) -7074 + (NN) 852 + (LL) 0
1D Compatibility (HY) -9600 + (ID) 3550
Total energy: -65194.0 ( -135.82 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_M040.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M040-query.scw
PDB file :
Tito_Scwrl_M040.pdb
: