Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTIC----NMSGEGLMACKPAVS----PPNPAPPS----AACCSALSHADMHCLC---------------SYRNSKLLPSM-GIDPNLALQL------PKKCKFPNAAH---C-----
1BEA Chain:? ((5-120))
--SCVPGWAIPHNPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGVAECPWILG
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28049 for 380 contacts (-73.8/contact) +
2D Compatibility (PS) -7979 + (NN) -7324 + (LL) 172
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -48330.0 ( -127.18 by residue)
QMean score : 0.425
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: