Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APSCPAVQQTLTTCLLYATNP--HG-P---PPEPCCNGIKTLHGQSQTPLDRRDVCGCLKSMMTNL----KL----------NLPAVATLPKECGVDLGYVISPDMDCSKT
1HSS Chain:A ((15-106))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPIVVD----------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49388 for 416 contacts (-118.7/contact) +
2D Compatibility (PS) -6118 + (NN) 367 + (LL) 996
1D Compatibility (HY) -4000 + (ID) 550
Total energy: -58693.0 ( -141.09 by residue)
QMean score : 0.247
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: