Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALSCGQIQLTVAPCIGYLRTP--GPS----VPAPCCNGIRSVYYQAKTTADRQGVCRCLKSTTLSLP-------G----LNLPALAGAPAKCGVNVPYKVAPSIDCNTVRH
1HSS Chain:A ((15-106))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVD------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45472 for 425 contacts (-107.0/contact) +
2D Compatibility (PS) -6641 + (NN) 925 + (LL) 2040
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -53848.0 ( -126.70 by residue)
QMean score : 0.277
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: