Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------------------KKDLPFCNV-ELLPCVLPFKVRGHGSKLPNGCCEKMKKSTSCMCRFLMAKERDLNAAAHRIFWFCKISVPNCPKI------------
2HFT Chain:? ((107-218))
NLGQPTIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKSS-------GKKTAKTNTNEFLIDVDKGEN-----YCFSVQAVIPSRTVNRKSTDSPVECMG
General information:
TITO was launched using:
RESULT:
Template:
2HFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11600 for 286 contacts (-40.6/contact) +
2D Compatibility (PS) -6371 + (NN) 508 + (LL) 576
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -18887.0 ( -66.04 by residue)
QMean score : 0.158
(partial model without unconserved sides chains):
PDB file :
Tito_2HFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HFT-query.scw
PDB file :
Tito_Scwrl_2HFT.pdb
: