Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADNLYLYKGSVKITEMTLNLNEAKIIVYEDSGGNKYTLDASGISTLTNIDDIKLSDLLEGKVKFIYQKKDSNAIQIKGLGNIISTLLATQKAVDGESILAEEVSKKPVVDTILKATDLVNLNKNIVETELEDKFVKKDASNLTDAVNQKAFAEKILPAKDGQKSILVEKLGGLLGEPGAVYGDSNPKITAKDFLAEKASLVKTDGSNIVTQTDKGKALVEAILNAKEPISNKEVKIVETELAKTFVKTADLGTPAVAGKVLDAKDGQKSILVEKLGRFLDTTSTEYSNQTAKVFSGEKGTKPTAEEVVTKLLANNKKDLTDEVAQNPGLRAAVTSNSGLRGTVIDNLKGDTDFKTDITIQVDAKDPAFQGFVREIISQPSFEIPTSDDAPLSWDWI-- |
| 3EDV Chain:A ((2-323)) | SHMRHRLFQLNREVDDLEQWIAEREVVAGSHELGQ---------------DYEHVTMLQERFREFARDTGNIGQERVDTVNHLADELINSGH--SDAATIAEW--KDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQDKHKK---LPEELGRD---------------------------QNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQ-------EKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR---------------------KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EDV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 69997 for 2099 contacts (33.3/contact) +
2D Compatibility (PS) -33356 + (NN) -8519 + (LL) 3956
1D Compatibility (HY) -5200 + (ID) 2100
Total energy: 24778.0 ( 11.80 by residue)
QMean score : 0.227
|
|
|