Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLKAWLITTFLLLYPSATFCDDCNFNLPYRGLSCNLDLSHKNLSNIKKLLNNSDKFVALTFDDGPSSNRVNNIINILENYKAKATFFLLGERINKK-TSEIVKKIYNAGHELGNHSWSHKKLTSLSSEKQLQELEKTNMVIKNAIERDVKWFRSPYGCHDDNLIKNTNQLNMCSILWTVDSLDWQGD-KPEILVDRVVGNVHNGAIILFHDHDNK-SNTVEALPQIIKILKKLGYEFVTLSEWEERVCKAKGVSMGEGVFKKILCG |
| 2C71 Chain:A ((5-195)) | -------------------------------------------------------KLVALTFDDGPDNVLTARVLDKLDKYNVKATFMVVGQRVN-DSTAAIIRRMVNSGHEIGNHSWSYSGMANMSPDQIRKSIADTNAVIQKYAGTTPKFFRPPNLETSPTLFNNV---DLVF-VGGLTANDWIPSTTAEQRAAAVINGVRDGTIILLHDVQPEPHPTPEALDIIIPTLKSRGYEFVTLTELFTLKGVPIDPSVKRMYNSVPL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87016 for 1576 contacts (-55.2/contact) +
2D Compatibility (PS) -20433 + (NN) -9375 + (LL) 3224
1D Compatibility (HY) -12400 + (ID) 3450
Total energy: -129450.0 ( -82.14 by residue)
QMean score : 0.549
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