Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQPEKTESTGLVLNIESPILIILCILSVAYFIYSEYSVEFTKKISKNDPFSRALKNRNKLFKRF-FMIR---
2J0Q Chain:I ((32-112))
KHLDDDE------DRKNPAYIPR---KGLFFEHDLRGQEGRWEHDKFREDEQAPKSRQELIALYGYDIRSAH
General information:
TITO was launched using:
RESULT:
Template:
2J0Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -622 for 208 contacts (-3.0/contact) +
2D Compatibility (PS) -5636 + (NN) 1144 + (LL) 832
1D Compatibility (HY) 2400 + (ID) 600
Total energy: -2482.0 ( -11.93 by residue)
QMean score : 0.211
(partial model without unconserved sides chains):
PDB file :
Tito_2J0Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J0Q-query.scw
PDB file :
Tito_Scwrl_2J0Q.pdb
: