Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------MSDLKTMMLNFGPQHPAAHGV-LRLVLEM---DGE------------IIERADPHIGLLHRGTE-KLIEHKTYLQALPY--FDRLDYVSPMSQEHAYSLCVEKLLQCEVPIRAKYLRVLFCELTRILNHLLNISSQALDVGAMTPLLWLF--------EEREKILEFY--ERASGARFHAAYIRPGGVAADVPEGLIEDI---AKFIEQFPQYIDDVDELLTENRIWKQRTVGISEISIKQALDWGFSGPMLRAAGLAWDLRKSQPYEIYDQLDFDIPVGQNGDCYDRYLVRMEEIRQSVSLVKQCIEKIPEGPVKTEDRKISPPPRTEMKRSMEALIHHFKLYSEGYHVPEGEAYAAVEAPKGEFGVYIVSDGTNRPYRCRIRAPGFAHLQALDFMAKGHMLADVAAIIGSLDIVFGEIDR |
| 4Z0V Chain:A ((7-440)) | PPAFTELQLPRYIMAGFPVCPKLSLEFGDPASSLFRWYKEAKPGAAGSSWTETDVEERVYTPSNADIGLRLKLHCTPGDGQRFGHSRELESVCVVEAGPGTCTFDHRHLYTKKVTEDALIRTVSYNILADTYAQTEFSRTVLYPYCAPYAL--ELDYRQNLIQKELTGYNADVICLQEVD-RAVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKELLEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTH----LYWHPKGGYIRLIQMAVAL--AHIRHVSCDLYPGIPVIFCGDF---------NSTPSTGMYHFVIN----GSIPEDHEDWASNGEEE--RCNMSLTHFFKLKSACGE----PAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQALPSVSHPSDHIALVCDLKWK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Z0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125357 for 2900 contacts (-43.2/contact) +
2D Compatibility (PS) -35956 + (NN) 2650 + (LL) 2612
1D Compatibility (HY) -12400 + (ID) 3300
Total energy: -171751.0 ( -59.22 by residue)
QMean score : 0.082
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