Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFFQKLTGKFCNFFTFKGLFASDIAIDLGTANTLVYQKNQG-I--------VLDEPSVVARIKEKGSYIPYAFGKKAKMMLGKTPGEIEA--------------------IRPL-----------------KDGVIADFKSAEEMLKYFIRSANTKLTVNKPNIIICVPSGSTPVERRAIQDAAESAGANEVFLIEEPMAAAIGAGLPV-TEPEGSMVVDIGGGTTEVAIISLGGIVY-----SRSARVGGDIMDEAIRSYIRENHKLLIG-------------ETTAEKIKKSLGSASLPDENNKEWMMVKGRDLVSGMPKEMLLSEYQVAESLIEPVHQIISAIKTALESTPPELSSDIVDKGIVLSGGGGLLRNLGKVISETTK-LPVHVADDPLCCVALGSGKVLENMDYFSHVLFKQD |
| 3QFU Chain:A ((16-393)) | -------------------NYGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDD---E--RLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMS------TRIEID--SFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKK-DV--DDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148660 for 2585 contacts (-57.5/contact) +
2D Compatibility (PS) -33690 + (NN) -11556 + (LL) 1728
1D Compatibility (HY) -6000 + (ID) 3800
Total energy: -201978.0 ( -78.13 by residue)
QMean score : 0.465
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